TY - JOUR
T1 - Machine Learning Models for Predicting Personalized Tacrolimus Stable Dosages in Pediatric Renal Transplant Patients
AU - Sánchez-Herrero, Sergio
AU - Calvet Liñan, Laura
AU - Juan, Ángel A
PY - 2023
Y1 - 2023
N2 - Tacrolimus, characterized by a narrow therapeutic index, significant toxicity, adverse effects, and interindividual variability, necessitates frequent therapeutic drug monitoring and dose adjustments in renal transplant recipients. This study aimed to compare machine learning (ML) models utilizing pharmacokinetic data to predict tacrolimus blood concentration. This prediction underpins crucial dose adjustments, emphasizing patient safety. The investigation focuses on a pediatric cohort. A subset served as the derivation cohort, creating the dose-prediction algorithm, while the remaining data formed the validation cohort. The study employed various ML models, including artificial neural network, RandomForestRegressor, LGBMRegressor, XGBRegressor, AdaBoostRegressor, BaggingRegressor, ExtraTreesRegressor, KNeighborsRegressor, and support vector regression, and their performances were compared. Although all models yielded favorable fit outcomes, the ExtraTreesRegressor (ETR) exhibited superior performance. It achieved measures of (Formula presented.) for MPE, (Formula presented.) for AFE, (Formula presented.) for AAFE, and (Formula presented.) for R, indicating accurate predictions and meeting regulatory standards. The findings underscore ML's predictive potential, despite the limited number of samples available. To address this issue, resampling was utilized, offering a viable solution within medical datasets for developing this pioneering study to predict tacrolimus trough concentration in pediatric transplant recipients.
AB - Tacrolimus, characterized by a narrow therapeutic index, significant toxicity, adverse effects, and interindividual variability, necessitates frequent therapeutic drug monitoring and dose adjustments in renal transplant recipients. This study aimed to compare machine learning (ML) models utilizing pharmacokinetic data to predict tacrolimus blood concentration. This prediction underpins crucial dose adjustments, emphasizing patient safety. The investigation focuses on a pediatric cohort. A subset served as the derivation cohort, creating the dose-prediction algorithm, while the remaining data formed the validation cohort. The study employed various ML models, including artificial neural network, RandomForestRegressor, LGBMRegressor, XGBRegressor, AdaBoostRegressor, BaggingRegressor, ExtraTreesRegressor, KNeighborsRegressor, and support vector regression, and their performances were compared. Although all models yielded favorable fit outcomes, the ExtraTreesRegressor (ETR) exhibited superior performance. It achieved measures of (Formula presented.) for MPE, (Formula presented.) for AFE, (Formula presented.) for AAFE, and (Formula presented.) for R, indicating accurate predictions and meeting regulatory standards. The findings underscore ML's predictive potential, despite the limited number of samples available. To address this issue, resampling was utilized, offering a viable solution within medical datasets for developing this pioneering study to predict tacrolimus trough concentration in pediatric transplant recipients.
KW - Machine learning
KW - Pharmacokinetics
KW - Therapeutic drug monitoring
KW - Modeling
KW - Personalized medicine
U2 - 10.3390/biomedinformatics3040057
DO - 10.3390/biomedinformatics3040057
M3 - Article
SN - 2673-7426
VL - 3
SP - 926
EP - 947
JO - BioMedInformatics
JF - BioMedInformatics
IS - 4
ER -