Recall for automated genotypic tropism testing

Christian Pou; Rocío Bellido; Maria Casadellà; Teresa Puig; Bonaventura Clotet; Richard Harrigan; Roger Paredes

doi:10.1128/JCM.00935-13

Recall for automated genotypic tropism testing

Christian Pou, Rocío Bellido, Maria Casadellà, Teresa Puig, Bonaventura Clotet, Richard Harrigan, Roger Paredes

Department of Medicine

Research output: Contribution to journal › Article › Research › peer-review

3 Citations (Scopus)

Abstract

Standardization of sequence chromatogram analysis is required for consistent genotypic tropism determination across laboratories. A freely available, fast, and automated chromatogram analysis tool (RECall) provided tropism interpretations equivalent to those of manual sequence editing of 521 V3 loop HIV-1 population sequences, suggesting that RECall can be useful in standardizing genotypic tropism testing across laboratories. Copyright © 2013, American Society for Microbiology.

Original language	English
Pages (from-to)	2754-2757
Journal	Journal of Clinical Microbiology
Volume	51
Issue number	8
DOIs	https://doi.org/10.1128/JCM.00935-13
Publication status	Published - 1 Aug 2013

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10.1128/JCM.00935-13

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title = "Recall for automated genotypic tropism testing",

abstract = "Standardization of sequence chromatogram analysis is required for consistent genotypic tropism determination across laboratories. A freely available, fast, and automated chromatogram analysis tool (RECall) provided tropism interpretations equivalent to those of manual sequence editing of 521 V3 loop HIV-1 population sequences, suggesting that RECall can be useful in standardizing genotypic tropism testing across laboratories. Copyright {\textcopyright} 2013, American Society for Microbiology.",

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T1 - Recall for automated genotypic tropism testing

AU - Pou, Christian

AU - Bellido, Rocío

AU - Casadellà, Maria

AU - Puig, Teresa

AU - Clotet, Bonaventura

AU - Harrigan, Richard

AU - Paredes, Roger

PY - 2013/8/1

Y1 - 2013/8/1

N2 - Standardization of sequence chromatogram analysis is required for consistent genotypic tropism determination across laboratories. A freely available, fast, and automated chromatogram analysis tool (RECall) provided tropism interpretations equivalent to those of manual sequence editing of 521 V3 loop HIV-1 population sequences, suggesting that RECall can be useful in standardizing genotypic tropism testing across laboratories. Copyright © 2013, American Society for Microbiology.

AB - Standardization of sequence chromatogram analysis is required for consistent genotypic tropism determination across laboratories. A freely available, fast, and automated chromatogram analysis tool (RECall) provided tropism interpretations equivalent to those of manual sequence editing of 521 V3 loop HIV-1 population sequences, suggesting that RECall can be useful in standardizing genotypic tropism testing across laboratories. Copyright © 2013, American Society for Microbiology.

U2 - 10.1128/JCM.00935-13

DO - 10.1128/JCM.00935-13

M3 - Article

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VL - 51

SP - 2754

EP - 2757

JO - Journal of Clinical Microbiology

JF - Journal of Clinical Microbiology

IS - 8

ER -

Recall for automated genotypic tropism testing

Abstract

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