Quantitation of magnetic resonance spectroscopy signals: The jMRUI software package

D. Stefan; F. Di Cesare; A. Andrasescu; E. Popa; A. Lazariev; E. Vescovo; O. Strbak; S. Williams; Z. Starcuk; M. Cabanas; D. Van Ormondt; D. Graveron-Demilly

doi:10.1088/0957-0233/20/10/104035

Quantitation of magnetic resonance spectroscopy signals: The jMRUI software package

D. Stefan, F. Di Cesare, A. Andrasescu, E. Popa, A. Lazariev, E. Vescovo, O. Strbak, S. Williams, Z. Starcuk, M. Cabanas, D. Van Ormondt, D. Graveron-Demilly

Research output: Contribution to journal › Article › Research › peer-review

334 Citations (Scopus)

Abstract

The software package jMRUI with Java-based graphical user interface enables user-friendly time-domain analysis of magnetic resonance spectroscopy (MRS) and spectroscopic imaging (MRSI) and HRMAS-NMR signals. Version 3.x has been distributed in more than 1200 groups or hospitals worldwide. The new version 4.x is a plug-in platform enabling the users to add their own algorithms. Moreover, it offers new functionalities compared to versions 3.x. The quantum-mechanical simulator based on NMR-SCOPE, the quantitation algorithm QUEST and the main MRSI functionalities are described. Quantitation results of signals obtained in vivo from a mouse and a human brain are given. © 2009 IOP Publishing Ltd.

Original language	English
Article number	104035
Journal	Measurement Science and Technology
Volume	20
Issue number	10
DOIs	https://doi.org/10.1088/0957-0233/20/10/104035
Publication status	Published - 1 Jan 2009

Keywords

HRMAS-NMR
Java
JMRUI software package
MR spectroscopy
MRS
MRSI
Plug-ins
Quantitation

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10.1088/0957-0233/20/10/104035

Cite this

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AU - Cesare, F. Di

AU - Andrasescu, A.

AU - Popa, E.

AU - Lazariev, A.

AU - Vescovo, E.

AU - Strbak, O.

AU - Williams, S.

AU - Starcuk, Z.

AU - Cabanas, M.

AU - Van Ormondt, D.

AU - Graveron-Demilly, D.

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AB - The software package jMRUI with Java-based graphical user interface enables user-friendly time-domain analysis of magnetic resonance spectroscopy (MRS) and spectroscopic imaging (MRSI) and HRMAS-NMR signals. Version 3.x has been distributed in more than 1200 groups or hospitals worldwide. The new version 4.x is a plug-in platform enabling the users to add their own algorithms. Moreover, it offers new functionalities compared to versions 3.x. The quantum-mechanical simulator based on NMR-SCOPE, the quantitation algorithm QUEST and the main MRSI functionalities are described. Quantitation results of signals obtained in vivo from a mouse and a human brain are given. © 2009 IOP Publishing Ltd.

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KW - Java

KW - JMRUI software package

KW - MR spectroscopy

KW - MRS

KW - MRSI

KW - Plug-ins

KW - Quantitation

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Quantitation of magnetic resonance spectroscopy signals: The jMRUI software package

Abstract

Keywords

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