PopDrowser: The population drosophila browser

Miquel Ràmia, Pablo Librado, Sònia Casillas, Julio Rozas, Antonio Barbadilla

Research output: Contribution to journalArticleResearchpeer-review

13 Citations (Scopus)

Abstract

Motivation: The completion of 168 genome sequences from a single population of Drosophila melanogaster provides a global view of genomic variation and an understanding of the evolutionary forces shaping the patterns of DNA polymorphism and divergence along the genome. Results: We present the 'Population Drosophila Browser' (PopDrowser), a new genome browser specially designed for the automatic analysis and representation of genetic variation across the D. melanogaster genome sequence. PopDrowser allows estimating and visualizing the values of a number of DNA polymorphism and divergence summary statistics, linkage disequilibrium parameters and several neutrality tests. PopDrowser also allows performing custom analyses on-the-fly using user-selected parameters. © The Author 2011. Published by Oxford University Press. All rights reserved.
Original languageEnglish
Article numberbtr691
Pages (from-to)595-596
JournalBioinformatics
Volume28
Issue number4
DOIs
Publication statusPublished - 1 Feb 2012

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