LymPHOS 2.0: An update of a phosphosite database of primary human T cells

Tien Dung Nguyen; Oriol Vidal-Cortes; Oscar Gallardo; Joaquin Abian; Montserrat Carrascal

doi:10.1093/database/bav115

LymPHOS 2.0: An update of a phosphosite database of primary human T cells

Tien Dung Nguyen, Oriol Vidal-Cortes, Oscar Gallardo, Joaquin Abian, Montserrat Carrascal

Research output: Contribution to journal › Article › Research › peer-review

7 Citations (Scopus)

Abstract

© 2015 The Author(s) 2015. Published by Oxford University Press. LymPHOS is a web-oriented database containing peptide and protein sequences and spectrometric information on the phosphoproteome of primary human T-Lymphocytes. Current release 2.0 contains 15 566 phosphorylation sites from 8273 unique phosphopeptides and 4937 proteins, which correspond to a 45-fold increase over the original database description. It now includes quantitative data on phosphorylation changes after time-dependent treatment with activators of the TCR-mediated signal transduction pathway. Sequence data quality has also been improved with the use of multiple search engines for database searching. LymPHOS can be publicly accessed at http://www.lymphos.org.

Original language	English
Article number	bav115
Journal	Database
Volume	2015
Issue number	1
DOIs	https://doi.org/10.1093/database/bav115
Publication status	Published - 1 Jan 2015

Access to Document

10.1093/database/bav115

Fingerprint Dive into the research topics of 'LymPHOS 2.0: An update of a phosphosite database of primary human T cells'. Together they form a unique fingerprint.

Cite this

@article{5849bd6c20cb47b48c757fbc7be1eac7,

title = "LymPHOS 2.0: An update of a phosphosite database of primary human T cells",

abstract = "{\textcopyright} 2015 The Author(s) 2015. Published by Oxford University Press. LymPHOS is a web-oriented database containing peptide and protein sequences and spectrometric information on the phosphoproteome of primary human T-Lymphocytes. Current release 2.0 contains 15 566 phosphorylation sites from 8273 unique phosphopeptides and 4937 proteins, which correspond to a 45-fold increase over the original database description. It now includes quantitative data on phosphorylation changes after time-dependent treatment with activators of the TCR-mediated signal transduction pathway. Sequence data quality has also been improved with the use of multiple search engines for database searching. LymPHOS can be publicly accessed at http://www.lymphos.org.",

author = "Nguyen, {Tien Dung} and Oriol Vidal-Cortes and Oscar Gallardo and Joaquin Abian and Montserrat Carrascal",

year = "2015",

month = jan,

day = "1",

doi = "10.1093/database/bav115",

language = "English",

volume = "2015",

number = "1",

}

TY - JOUR

T1 - LymPHOS 2.0: An update of a phosphosite database of primary human T cells

AU - Nguyen, Tien Dung

AU - Vidal-Cortes, Oriol

AU - Gallardo, Oscar

AU - Abian, Joaquin

AU - Carrascal, Montserrat

PY - 2015/1/1

Y1 - 2015/1/1

N2 - © 2015 The Author(s) 2015. Published by Oxford University Press. LymPHOS is a web-oriented database containing peptide and protein sequences and spectrometric information on the phosphoproteome of primary human T-Lymphocytes. Current release 2.0 contains 15 566 phosphorylation sites from 8273 unique phosphopeptides and 4937 proteins, which correspond to a 45-fold increase over the original database description. It now includes quantitative data on phosphorylation changes after time-dependent treatment with activators of the TCR-mediated signal transduction pathway. Sequence data quality has also been improved with the use of multiple search engines for database searching. LymPHOS can be publicly accessed at http://www.lymphos.org.

AB - © 2015 The Author(s) 2015. Published by Oxford University Press. LymPHOS is a web-oriented database containing peptide and protein sequences and spectrometric information on the phosphoproteome of primary human T-Lymphocytes. Current release 2.0 contains 15 566 phosphorylation sites from 8273 unique phosphopeptides and 4937 proteins, which correspond to a 45-fold increase over the original database description. It now includes quantitative data on phosphorylation changes after time-dependent treatment with activators of the TCR-mediated signal transduction pathway. Sequence data quality has also been improved with the use of multiple search engines for database searching. LymPHOS can be publicly accessed at http://www.lymphos.org.

U2 - 10.1093/database/bav115

DO - 10.1093/database/bav115

M3 - Article

VL - 2015

IS - 1

M1 - bav115

ER -