Changes in soil bacterial community triggered by drought-induced gap succession preceded changes in soil C stocks and quality

Jorge Curiel Yuste, Josep Barba, Antonio José Fernandez-Gonzalez, Manuel Fernandez-Lopez, Stefania Mattana, Jordi Martinez-Vilalta, Pau Nolis, Francisco Lloret

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31 Citations (Scopus)


The aim of this study was to understand how drought-induced tree mortality and subsequent secondary succession would affect soil bacterial taxonomic composition as well as soil organic matter (SOM) quantity and quality in a mixed Mediterranean forest where the Scots pine (Pinus sylvestris) population, affected by climatic drought-induced die-off, is being replaced by Holm-oaks (HO; Quercus ilex). We apply a high throughput DNA pyrosequencing technique and 13C solid-state Nuclear Magnetic Resonance (CP-MAS 13C NMR) to soils within areas of influence (defined as an surface with 2-m radius around the trunk) of different trees: healthy and affected (defoliated) pines, pines that died a decade ago and healthy HOs. Soil respiration was also measured in the same spots during a spring campaign using a static close-chamber method (soda lime). A decade after death, and before aerial colonization by the more competitive HOs have even taken place, we could not find changes in soil C pools (quantity and/or quality) associated with tree mortality and secondary succession. Unlike C pools, bacterial diversity and community structure were strongly determined by tree mortality. Convergence between the most abundant taxa of soil bacterial communities under dead pines and colonizer trees (HOs) further suggests that physical gap colonization was occurring below-ground before above-ground colonization was taken place. Significantly higher soil respiration rates under dead trees, together with higher bacterial diversity and anomalously high representation of bacteria commonly associated with copiotrophic environments (r-strategic bacteria) further gives indications of how drought-induced tree mortality and secondary succession were influencing the structure of microbial communities and the metabolic activity of soils.©2012 The Authors. Ecology and Evolution published by Blackwell Publishing Ltd.
Original languageEnglish
Pages (from-to)3016-3031
JournalEcology and Evolution
Publication statusPublished - 1 Dec 2012


  • Climate change
  • Drought
  • Ecosystem functioning
  • Forest dieback
  • Gap colonization
  • Microbial diversity
  • Nutrient cycling
  • Pyrosequencing
  • Tree mortality


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