Replication data for: "An easy-to-use pipeline to analyze amplicon-based Next Generation Sequencing results of human mitochondrial DNA from degraded samples"

Description

The dataset contains the raw data, in FastQ format, of the sequences used to optimize the script "NCR-mtDNA_ampliconbasedngs", available in the GitHub repository named "DanielRCA/NCR-mtDNA_ampliconbasedngs". The dataset includes 163 samples (15 present-day samples and 148 ancient samples from before the 20th century). For each sample, there are two FastQ files, as the sequencing was performed in a paired-end format.

Date made available	26 Jul 2024
Publisher	CORA.Repositori de Dades de Recerca

Contact person

Cristina Maria Pereira Dos Santos

DOI
10.34810/data1541

1 Finished
1 Active

DEMOGRAPHIC AND SOCIAL ORGANIZATION, MOBILITY, KINSHIP, AND DISEASE DURING THE BRONZE AGE: THE CHALLENGE OF COLLECTIVE BURIALS
Pereira Dos Santos, C. M. (Principal Investigator), Malgosa Morera, A. (Co-Investigador/a Principal), Esteve Gràcia, X. (Collaborator), Llamas, B. (Collaborator), Martínez Rodríguez, P. (Collaborator), Molina Moreno, M. (Collaborator), Roca Rada, X. (Collaborator), Ruiz de la Cuesta Aguirre, D. (Collaborator), Teixeira, J. P. (Collaborator), Aluja Paris, M. P. (Investigator), Isidro Llorens, A. (Investigator), Armentano Oller, N. (Collaborator) & Campoy Caballero, M. R. (Collaborator)
European Regional Development Fund (FEDER)
1/09/23 → 31/08/27
Project: Research Projects and Other Grants
Reevaluación del infanticidio y selección de sexo en época ibérica
Pereira Dos Santos, C. M. (Principal Investigator), Malgosa Morera, A. (Co-Investigador/a Principal), Aluja Paris, M. P. (Investigator), Galtes Vicente, J. I. (Investigator), Isidro Llorens, A. (Investigator), Molist Capella, N. (Investigator), Jordana Comin, X. (Collaborator), Busquets Costa, F. X. (Collaborator), Mestres Santacreu, I. (Collaborator), Duran Caixal, M. (Collaborator), Fàbregas Espadaler, M. (Collaborator), Vinueza Espinosa, D. C. (Collaborator), Schroeder, H. (Collaborator), Martinez-Labarga, C. (Collaborator), Montiel Duarte, R. (Collaborator), Mateiu, L. (Collaborator), Ruiz de la Cuesta Aguirre, D. (Collaborator), Sandoval Avila, C. A. (Collaborator), Domenech Moreno, N. (Collaborator) & Martirosyan Ghazaryan, A. (Collaborator)
Ministerio de Ciencia e Innovación (MICINN), European Regional Development Fund (FEDER)
1/01/19 → 31/12/22
Project: Research Projects and Other Grants

An easy-to-use pipeline to analyze amplicon-based Next Generation Sequencing results of human mitochondrial DNA from degraded samples
Cuesta-Aguirre, D. R., Malgosa, A. & Santos, C., 21 Nov 2024, In: PloS one. 19, 11, 18 p., e0311115.
Research output: Contribution to journal › Article › Research › peer-review

Open Access
2 Link opens in a new tab Citations (Scopus)

Unraveling the Genetic History of Northeastern Iberians
Ruiz de la Cuesta Aguirre, D. (Author), Pereira Dos Santos, C. M. (Director) & Malgosa Morera, A. (Director), 27 Jun 2025
Student thesis: Doctoral thesis

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Replication data for: "An easy-to-use pipeline to analyze amplicon-based Next Generation Sequencing results of human mitochondrial DNA from degraded samples"

Description

Contact person

DOI

Projects

DEMOGRAPHIC AND SOCIAL ORGANIZATION, MOBILITY, KINSHIP, AND DISEASE DURING THE BRONZE AGE: THE CHALLENGE OF COLLECTIVE BURIALS

Reevaluación del infanticidio y selección de sexo en época ibérica

Research output

An easy-to-use pipeline to analyze amplicon-based Next Generation Sequencing results of human mitochondrial DNA from degraded samples

Student theses

Unraveling the Genetic History of Northeastern Iberians

Cite this