TY - JOUR
T1 - Deriving Structural Information from Experimentally Measured Data on Biomolecules
AU - van Gunsteren, Wilfred F.
AU - Allison, Jane R.
AU - Daura, Xavier
AU - Dolenc, Jožica
AU - Hansen, Niels
AU - Mark, Alan E.
AU - Oostenbrink, Chris
AU - Rusu, Victor H.
AU - Smith, Lorna J.
PY - 2016/1/1
Y1 - 2016/1/1
N2 - © 2016 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim During the past half century, the number and accuracy of experimental techniques that can deliver values of observables for biomolecular systems have been steadily increasing. The conversion of a measured value Qexpof an observable quantity Q into structural information is, however, a task beset with theoretical and practical problems: 1) insufficient or inaccurate values of Qexp, 2) inaccuracies in the function (Formula presented.) used to relate the quantity Q to structure (Formula presented.), 3) how to account for the averaging inherent in the measurement of Qexp, 4) how to handle the possible multiple-valuedness of the inverse (Formula presented.) of the function (Formula presented.), to mention a few. These apply to a variety of observable quantities Q and measurement techniques such as X-ray and neutron diffraction, small-angle and wide-angle X-ray scattering, free-electron laser imaging, cryo-electron microscopy, nuclear magnetic resonance, electron paramagnetic resonance, infrared and Raman spectroscopy, circular dichroism, Förster resonance energy transfer, atomic force microscopy and ion-mobility mass spectrometry. The process of deriving structural information from measured data is reviewed with an eye to non-experts and newcomers in the field using examples from the literature of the effect of the various choices and approximations involved in the process. A list of choices to be avoided is provided.
AB - © 2016 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim During the past half century, the number and accuracy of experimental techniques that can deliver values of observables for biomolecular systems have been steadily increasing. The conversion of a measured value Qexpof an observable quantity Q into structural information is, however, a task beset with theoretical and practical problems: 1) insufficient or inaccurate values of Qexp, 2) inaccuracies in the function (Formula presented.) used to relate the quantity Q to structure (Formula presented.), 3) how to account for the averaging inherent in the measurement of Qexp, 4) how to handle the possible multiple-valuedness of the inverse (Formula presented.) of the function (Formula presented.), to mention a few. These apply to a variety of observable quantities Q and measurement techniques such as X-ray and neutron diffraction, small-angle and wide-angle X-ray scattering, free-electron laser imaging, cryo-electron microscopy, nuclear magnetic resonance, electron paramagnetic resonance, infrared and Raman spectroscopy, circular dichroism, Förster resonance energy transfer, atomic force microscopy and ion-mobility mass spectrometry. The process of deriving structural information from measured data is reviewed with an eye to non-experts and newcomers in the field using examples from the literature of the effect of the various choices and approximations involved in the process. A list of choices to be avoided is provided.
KW - ambiguities
KW - averaging
KW - biomolecular structure determination
KW - errors
KW - experimental data
U2 - 10.1002/anie.201601828
DO - 10.1002/anie.201601828
M3 - Review article
SN - 1433-7851
VL - 55
SP - 15990
EP - 16010
JO - Angewandte Chemie - International Edition
JF - Angewandte Chemie - International Edition
IS - 52
ER -